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View Structure Prediction Details

Protein: SDT_ARATH
Organism: Arabidopsis thaliana
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SDT_ARATH.

Description E-value Query
Range
Subject
Range
gi|75907835, gi|... - gi|75907835|ref|YP_322131.1| non-ribosomal peptide synthase [Anabaena variabilis ATCC 29413], gi|757...
351.0 [0..2] [450..1125]

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Predicted Domain #1
Region A:
Residues: [1-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIHIGSSIP LMVEKMLTEM VKPSKHIPQQ TLNLSTLDND PYNEVIYKAC YVFKAKNVAD  60
   61 DDNRPEALLR EALSDLLGYY YPLSGSLKRQ ESDRKLQLSC GGDGGGVPFT VATANVELSS 120
  121 LKNLENIDSD TALNFLPVLH VDIDGYRPFA LQVTKFECGG FILGMAMSHA MCDGYGEGHI 180
  181 MCALTDLAGG KKKPMVTPIW ERERLVGKPE DDQPPFVPGD DTAASPYLPT DDWVTEKITI 240
  241 RADSIRRLKE ATLKEYDFSN ETITTFEVIG AYLWKSRVKA LNLDRDGVTV LGLSVGIRNV 300
  301 VDPPLPDGYY GNAYIDMYVP LTAREVEEFT ISDIVKLIKE AKRNAHDKDY LQEELANTEK 360
  361 IIKMNLTIKG KKDGLFCLTD WRNIGIFGSM DFGWDEPVNI VPVVPSETAR TVNMFMRPSR 420
  421 LESDMVGGVQ IVVTLPRIAM VKFKEEMEAL E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.221849
Match: 2e1tA
Description: No description for 2e1tA was found.

YRC Informatics Platform - Version 3.0
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