| Protein: | CHR35_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 888 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CHR35_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
409.0 | [0..2] | [888..606] |
|
Region A: Residues: [1-311] |
1 11 21 31 41 51
| | | | | |
1 MGFVYIVMTG YYKNVHKRKQ NQVDDGPEAK RVKSSAKVID YSNPFAVSNM LEALDSGKFG 60
61 SVSKELEEIA DMRMDLVKRS IWLYPSLAYT VFEAEKTMDN QQVVEGVINL DDDDDDDTDV 120
121 EKKALCVVPS SSEIVLLDSD DEDNERQRPM YQFQSTLVQH QKNQGDVTPL IPQCSFEEVD 180
181 LGRGKEMPSA IKAIVEGQTS RGKVLPIENG VVNEKGVYVG VEEDDSDNES EAADEDLGNI 240
241 WNEMALSIEC SKDVARETSH KEKADVVEDC EHSFILKDDM GYVCRVCGVI EKSILEIIDV 300
301 QFTKAKRNTR T
|
| Detection Method: |  |
| Confidence: | 5.221849 |
| Match: | 1gm5A |
| Description: | RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.141433535514844 | bayes_pls_golite062009 |
|
Region A: Residues: [312-888] |
1 11 21 31 41 51
| | | | | |
1 YASETRTKRF GESDNELKFS EEGLMIGGLA AHPTHAAEMK PHQIEGFQFL CSNLVADDPG 60
61 GCIMAHAPGS GKTFMIISFM QSFLAKYPQA KPLVVLPKGI LPTWKKEFVR WQVEDIPLLD 120
121 FYSAKAENRA QQLSILKQWM EKKSILFLGY QQFSTIVCDD TTDSLSCQEI LLKVPSILIL 180
181 DEGHTPRNED TNLLQSLAQV QTPRKVVLSG TLYQNHVKEV FNILNLVRPK FLKLDTSKSA 240
241 VKRILAYTPC DVRGRLTGSN SDMASMFNET VEHTLQKSED FTVKIKVIQD LREMTKKVLH 300
301 YYKGDFLDEL PGLADFTVVL NLSPKQLNEV KKLRREKRKF KVSAVGSAIY LHPKLKVFSD 360
361 KSDDVSDTTM DEMVEKLDLN EGVKAKFFLN LINLCDSAGE KLLVFSQYLI PLKFLERLAA 420
421 LAKGWKLGKE VFVLTGNTSS EQREWSMETF NSSPDAKIFF GSIKACGEGI SLVGASRILI 480
481 LDVPLNPSVT RQAIGRAFRP GQKKMVHAYR LIAGSSPEEE DHNTCFKKEV ISKMWFEWNE 540
541 YCGYQNFEVE TIDVDEAGDT FLESPALRED IRVLYKR
|
| Detection Method: | |
| Confidence: | 72.30103 |
| Match: | 1z3iX |
| Description: | Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.470983068319171 | bayes_pls_golite062009 |
| hydrolase activity | 0.0582794297634999 | bayes_pls_golite062009 |
