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View Structure Prediction Details

Protein: gi|15221933, gi|...
Organism: Arabidopsis thaliana
Length: 573 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15221933, gi|....

Description E-value Query
Range
Subject
Range
gi|4468805, gi|1... - pir||T04733 auxin-regulated protein GH3 homolog F6G17.40 - Arabidopsis thaliana, gi|7270721|emb|CAB...
777.0 [0..5] [571..22]

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Predicted Domain #1
Region A:
Residues: [1-573]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSVELKDL EVLTTNAKQI QDDVLKEILT LNANTEYLKR FLDGSSDKEL FKKNVPVVSY  60
   61 NDVKPYIERV ANGEPSDVIS GGTITRFVQS TGTSGGIHKI FPVNDKYIEN LGYLLAVSSL 120
  121 ITSNDKVDEK GKKMAFLYNR LESKTPSGLA LSSSFTSYFM SDYFKNRSSK CNSEYTSPDQ 180
  181 VILCPDNNQS VYCHLLCGLS QREKVVGVSA TFAHALIKAI NALQIYWKEL SSNIRSGHVS 240
  241 EWITDLDCKN AVSAILGGPD PELADVIEQE CSHKSWEGII TRLWPKAKFI ECIVTGQMAQ 300
  301 YIPTLDFYSN KLPIVSMVYG SSESIFGVNV DPLSKPQDVS YTFLPNISYF EFLPIDHEED 360
  361 MNTIVDLVGV KLGCYYETVV TSYFGLHRYL IGDILQVTGF YNNTPQFRFV RRKNIVLSVN 420
  421 SEATTEQDIL KGLASATLVL ESSNSMLTGF TCYADISSFP GHYVFYWELK AKDVDDVVEL 480
  481 DENVLEECCY ALEESFDALY KRLRSKEGSI GALEIKVVQQ GTFDSLMEYF ISKGGSVAQY 540
  541 KTPMCINSSE TLAVLEDKVI ARFYSQKSPP LNL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.34
Match: 1amuA
Description: Phenylalanine activating domain of gramicidin synthetase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.1635513199224 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle