| Protein: | COPA1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1216 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for COPA1_ARATH.
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MLTKFETKSN RVKGLSFHPK RPWILASLHS GVIQLWDYRM GTLIDRFDEH EGPVRGVHFH 60
61 NSQPLFVSGG DDYKIKVWNY KNHRCLFTLL GHLDYIRTVQ FHHEYPWIVS ASDDQTIRIW 120
121 NWQSRTCVSV LTGHNHYVMC ASFHPKEDLV VSASLDQTVR VWD
|
| Detection Method: |  |
| Confidence: | 86.221849 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [164-235] |
1 11 21 31 41 51
| | | | | |
1 IGALRKKTVS PADDIMRLTQ MNSDLFGGVD AIVKYVLEGH DRGVNWAAFH PTLPLIVSGA 60
61 DDRQVKLWRM NE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [236-319] |
1 11 21 31 41 51
| | | | | |
1 TKAWEVDTLR GHMNNVSSVM FHAKQDIIVS NSEDKSIRVW DATKRTGLQT FRREHDRFWI 60
61 LAVHPEMNLL AAGHDSGMIV FKLE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [320-558] |
1 11 21 31 41 51
| | | | | |
1 RERPAFALSG DSLFYAKDRF LRYYEYSTQR DSQVIPIRRP GTPSLNQSPR TLSYSPTENA 60
61 VLICSDLDGG SYELYIIPKD SVGRSDVVQD AKRGTGGSAV FIARNRFAVL EKSTSQVLVK 120
121 NLKNEVVKKS PLPIPTDAIF YAGTGNLLCR SEDKVVIFDL QQRLVLGELQ TPFVRYVVWS 180
181 SDMESVALLS KHTIIIASKK LVLQCTLHET IRVKSGAWDD NGVFIYTTLN HIKYCLPNG
|
| Detection Method: | |
| Confidence: | 28.69897 |
| Match: | 1r5mA |
| Description: | Crystal Structure Of The C-Terminal WD40 Domain Of Sif2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [559-798] |
1 11 21 31 41 51
| | | | | |
1 DSGIIRTLDV PIYITKVSGN TIFCLDRDGK NKAITINATE YIFKLSLLRK RYDHVMSMIK 60
61 NSQLCGQAMI AYLQQKGFPE VALHFVEDER IRFNLALESG NISVAVASAT QINEKDHWYR 120
121 LGVEALRQGN SGIVEFAYQQ TKNFERLSFL YLITGNLDKL SKLMKIAEVK NNVMGQFHNA 180
181 LYLGDVKERV KILENAGHLP LAYITASVHG LNDIAERLAT ELGDNVPSLP EGKTPSLLMP 240
241
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [799-877] |
1 11 21 31 41 51
| | | | | |
1 PTPIMCGGDW PLLRVMKGIF EGGLESADRG GTVDEEDVEG DWGEELDINV DGMENRDIED 60
61 ILAAAEAGEE ENDEEGGWG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [878-988] |
1 11 21 31 41 51
| | | | | |
1 LEDLVLPPEL DTPKASANAR SSVFVTPPQG MPVSQSWSQK SSLAAEQAAA GSFDTAMRLL 60
61 HRQLGIKNFT PLKSMFLDLF NGSHSYLRAF SSCPVVPLAI ERGWSESSSP N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [989-1216] |
1 11 21 31 41 51
| | | | | |
1 VRSPPALVYD FSQLDEKLKS GYKATTTGKF TEALRLFLSI LHTIPLVVVE TRREVDEVKE 60
61 LIVIVKEYVL GLQMELKRRE MKDDPVRQQE LAAYFTHCNL QTPHLRLALL SAMGVCYKAK 120
121 NLATASNFAR RLLETSPVDS QAKMARQVVQ AAERNMTDET KLNYDFRNPF VVCGSTYVPI 180
181 YRGQKDVSCP YCTARFVPNQ EGNICTVCDL AVIGADASGL LCSPSQVR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
