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View Structure Prediction Details

Protein: gi|6714462, gi|1...
Organism: Arabidopsis thaliana
Length: 378 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6714462, gi|1....

Description E-value Query
Range
Subject
Range
GALM_RAT - Aldose 1-epimerase OS=Rattus norvegicus GN=Galm PE=1 SV=1
373.0 [0..79] [376..43]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVSLADNN EEKSTDLKKF KGGVTDHSIS KANDNDHDDD DHDQDDDNDG DHDDDDHDDD  60
   61 NDHDDDNNDH 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [71-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDDDNNDDNN DGDDDHDDDN NDDGDDEKKT LRVHELKKGN LTVKFTNRGA SIMSLLFPNI  60
   61 NASKKEKAAA NDGKNTIHGG TKESSDVIWR VKKHKHNGKK PYIVFTYTTS PDGDQGKLEV 120
  121 TVTYKLVGEN RLKMVMQAKA KEKTTPLNLV HRSYWNLGGH NNEDIFSEEI QILGSGYTHL 180
  181 DDNLTPTGKI LAVKGTPFDF RQLRPIKDNI NELKTGYGIN YCLDGVANKM RKVVELVDNK 240
  241 SKIKMELSTD QSGLRLKTTK PKNGSVHKAY SGLCLESHAI NYQYRSSQII EPGETYKHTM 300
  301 LFKFSFVP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 102.0
Match: 1snzA
Description: Crystal structure of apo human galactose mutarotase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.24087518312023 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle