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View Structure Prediction Details

Protein: gi|6522586, gi|1...
Organism: Arabidopsis thaliana
Length: 612 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6522586, gi|1....

Description E-value Query
Range
Subject
Range
gi|11264161, gi|... - gi|6522581|emb|CAB61946.1| beta-D-glucan exohydrolase-like protein [Arabidopsis thaliana], gi|307254...
580.0 [0..1] [601..1]

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Predicted Domain #1
Region A:
Residues: [1-612]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDNEKSYVY KNREAPVEAR VKDLLSRMTL AEKIGQMTLI ERSVASEAVI RDFSIGSVLN  60
   61 RAGGWPFEDA KSSNWADMID GFQRSALESR LGIPIIYGID AVHGNNDVYG ATIFPHNIGL 120
  121 GATRDADLVK RIGAATALEV RACGAHWAFA PCVAVVKDPR WGRCYESYGE VAQIVSEMTS 180
  181 LVSGLQGEPS KDHTNGYPFL AGRKNVVACA KHFVGDGGTN KAINEGNTIL RYEDLERKHI 240
  241 APYKKCISQG VSTVMASYSS WNGDKLHSHY FLLTEILKQK LGFKGYVVSD WEGLDRLSDP 300
  301 PGSNYRNCVK IGINAGIDMV MVPFKYEQFR NDLIDLVESG EVSMARVNDA VERILRVKFV 360
  361 AGLFEFPLTD RSLLPTVGCK EHRELAREAV RKSLVLLKNG RYGEFLPLNC NAERILVVGT 420
  421 HADDLGYQCG GWTKTMYGQS GRITDGTTLL DAIKAAVGDE TEVIYEKSPS EETLASGYRF 480
  481 SYAIVAVGES PYAETMGDNS ELVIPFNGSE IITTVAEKIP TLVILFSGRP MFLEPQVLEK 540
  541 AEALVAAWLP GTEGQGIADV IFGDYDFRGK LPATWFKRVD QLPLDIESNG YLPLFPLGFG 600
  601 LNGDSVENSD TV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 160.0
Match: 1ex1A
Description: Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on glycosyl bonds 3.1190602686215 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 2.98773241907716 bayes_pls_golite062009
catalytic activity 2.22613067995402 bayes_pls_golite062009
hydrolase activity 1.22060946899705 bayes_pls_golite062009
chitinase activity 0.67854733864231 bayes_pls_golite062009
glucosidase activity 0.58717079348538 bayes_pls_golite062009
hexosaminidase activity 0.16438321606077 bayes_pls_golite062009
amylase activity 0.0914002140078796 bayes_pls_golite062009
alpha-amylase activity 0.0521244165288097 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle