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View Structure Prediction Details

Protein: gi|3212863, gi|7...
Organism: Arabidopsis thaliana
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3212863, gi|7....

Description E-value Query
Range
Subject
Range
gi|17064894, gi|... - gi|31711742|gb|AAP68227.1| At5g38640 [Arabidopsis thaliana], gi|17064894|gb|AAL32601.1| Unknown prot...
319.0 [0..1] [300..343]

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Predicted Domain #1
Region A:
Residues: [1-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQAFQEVVK DYSTPPENTL NRDMTAQISS YVSFLIECRP LSISMGNAIR FVKNRIAKLP  60
   61 ITLSESEAKA SLHSDIERFI NEKIIGADTV IVEHAVTKIR DGDVLLTYGS STVIEMILVH 120
  121 AHELGKKFRV FVVDSRPKLQ GKLLLRRLIK RGINCTYTHI TAISYIMHQV TKVFLGASSV 180
  181 FSNGTVYSRV GTACVAMVAN AFRVPVLVCC EAYKFHEKVQ LDYSICSNEL GDPNAISKVH 240
  241 GREDINYLNG LTNNAKLKFL NLMYDATPSD YISMIITDYG MVPPTSVPVI VREYQKEHLL 300
  301 QSSKIVI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.0
Match: 1t9kA
Description: X-ray crystal structure of aIF-2B alpha subunit-related translation initiation factor [Thermotoga maritima]
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.787268490517916 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle