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View Structure Prediction Details

Protein: 2A5N_ARATH
Organism: Arabidopsis thaliana
Length: 510 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 2A5N_ARATH.

Description E-value Query
Range
Subject
Range
gi|109084945 - gi|109084945|ref|XP_001112240.1| PREDICTED: similar to gamma isoform of regulatory subunit B56, prot...
807.0 [0..17] [508..236]

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Predicted Domain #1
Region A:
Residues: [1-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK  60
   61 SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV PNTEKQNLFI KKLNLCRVVF 120
  121 DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN 180
  181 KVIDALDLEE EEPSMDLAWP HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD 240
  241 SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII 300
  301 NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY 360
  361 WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA RCLNSLHFQV AERALFLWNN 420
  421 NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF 480
  481 KEDESKAAET EAKREATWKR LEELGVRKAS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2nppB
Description: No description for 2nppB was found.

Predicted functions:

Term Confidence Notes
binding 0.373576425899935 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle