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View Structure Prediction Details

Protein: CESA2_ARATH
Organism: Arabidopsis thaliana
Length: 1084 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CESA2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTGGRLIAG SHNRNEFVLI NADESARIRS VQELSGQTCQ ICGDEIELTV SSELFVACNE  60
   61 CAFPVCRPCY EYERREGNQA CPQCKTRYKR IKGSPRVDG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 1weoA
Description: Solution structure of RING-finger in the catalytic subunit (IRX3) of cellulose synthase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [100-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDEEEEDIDD LEYEFDHGMD PEHAAEAALS SRLNTGRGGL DSAPPGSQIP LLTYCDEDAD  60
   61 MYSDRHALIV PPSTGYGNRV YPAPFTDSSA PPQARSMVPQ KDIAEYGYGS VAWKDRMEVW 120
  121 KRRQGEKLQV IKHEGGNNGR GSNDDDELDD PDMPMMDEGR QPLSRKLPIR SSRINPYRML 180
  181 ILCRLAILGL FFHYRILHPV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [300-810]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDAYGLWLTS VICEIWFAVS WILDQFPKWY PIERETYLDR LSLRYEKEGK PSGLAPVDVF  60
   61 VSTVDPLKEP PLITANTVLS ILAVDYPVDK VACYVSDDGA AMLTFEALSD TAEFARKWVP 120
  121 FCKKFNIEPR APEWYFSQKM DYLKNKVHPA FVRERRAMKR DYEEFKVKIN ALVATAQKVP 180
  181 EEGWTMQDGT PWPGNNVRDH PGMIQVFLGH SGVRDTDGNE LPRLVYVSRE KRPGFDHHKK 240
  241 AGAMNSLIRV SAVLSNAPYL LNVDCDHYIN NSKAIRESMC FMMDPQSGKK VCYVQFPQRF 300
  301 DGIDRHDRYS NRNVVFFDIN MKGLDGIQGP IYVGTGCVFR RQALYGFDAP KKKKPPGKTC 360
  361 NCWPKWCCLC CGLRKKSKTK AKDKKTNTKE TSKQIHALEN VDEGVIVPVS NVEKRSEATQ 420
  421 LKLEKKFGQS PVFVASAVLQ NGGVPRNASP ACLLREAIQV ISCGYEDKTE WGKEIGWIYG 480
  481 SVTEDILTGF KMHCHGWRSV YCMPKRAAFK G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.0
Match: 2z87A
Description: No description for 2z87A was found.

Predicted Domain #4
Region A:
Residues: [811-970]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAPINLSDRL HQVLRWALGS VEIFLSRHCP IWYGYGGGLK WLERFSYINS VVYPWTSLPL  60
   61 IVYCSLPAVC LLTGKFIVPE ISNYAGILFM LMFISIAVTG ILEMQWGGVG IDDWWRNEQF 120
  121 WVIGGASSHL FALFQGLLKV LAGVNTNFTV TSKAADDGAF 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [971-1084]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SELYIFKWTT LLIPPTTLLI INIIGVIVGV SDAISNGYDS WGPLFGRLFF ALWVIVHLYP  60
   61 FLKGMLGKQD KMPTIIVVWS ILLASILTLL WVRVNPFVAK GGPVLEICGL NCGN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle