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View Structure Prediction Details

Protein: gi|15238412, gi|...
Organism: Arabidopsis thaliana
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15238412, gi|....

Description E-value Query
Range
Subject
Range
gi|91806808 - gi|91806808|gb|ABE66131.1| peptidase C1A papain family protein [Arabidopsis thaliana]
359.0 [0..1] [202..1]

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Predicted Domain #1
Region A:
Residues: [1-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESEDKKFGE EHKSESESNE ESIVAGVGAG RNGGNKSDSD EESAVVGVGA GRKGKNKKSS  60
   61 SSSSSSKKNK SPAKASTKRF TKEDEEWAKD LPSDFTTNCK DWFQYLSGAI KQGKLSVCWA 120
  121 VAIARCVQAS FAIRGIKVEL SPQHLINNIT GKSKEGDIIK FEELSDYLKN QGLVLEEVCK 180
  181 FSGSIKATCP KECSKQTSDD SFYKIKEFNV ITKKDVKEED LLKLVYQRPI VGEHYWLIQN 240
  241 SYGEAWGEKG IGKIIRKCSL KNGESSLFVG AIDIVICMKP SSTSARSGGE REKVVDSRK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 9.17
Match: 1pciA
Description: Caricain (protease omega)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.465394995609075 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle