| Protein: | PUB50_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 765 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB50_ARATH.
| Description | E-value | Query Range |
Subject Range |
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460.0 | [0..38] | [704..119] |
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450.0 | [0..38] | [704..117] |
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447.0 | [0..23] | [704..107] |
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443.0 | [0..23] | [704..99] |
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Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MEETKTHELE VEAESGSRME KVYIAVGNDV QEGYKTIHWA LKKWNNIPIS IVLLHLCNIS 60
61 QDFVYTPFGK LPASSVSEEK LQVLRKYEDQ KIDKLLSKYI TFCGKVCPLS VNFVLFGKSK 120
121 SAISGSFYVY QNKPEFCEFY IICGGKMVSL KN
|
| Detection Method: |  |
| Confidence: | 2.41 |
| Match: | 1wjgA |
| Description: | Crystal structure of a probable ATP binding protein from thermus themophilus HB8 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [153-215] |
1 11 21 31 41 51
| | | | | |
1 DVNNNNSNIR SWIGKMFHDP GRNLDRSSGN NDDPTASGSS WDKNLQEIEN YFQQLLSLNL 60
61 AEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [216-667] |
1 11 21 31 41 51
| | | | | |
1 ETENVVEEEQ EDDDDVALNV LQHMDVAEKL EYVRRKVNEA KLMIDEKSRE VKVNAERSNR 60
61 AEWAISLCNS RIGEFEAWIK EESERREKLQ ATLDSDKECI EEAKNYVEKG KTKLHSLAEL 120
121 QEVLSSKVKT MMEAKSQAEV ELERVVLQRG EMITEIEKLR SQRDVFNRRI EFCKEREVIG 180
181 SVSKEEVKCG YREYVAEDIR LATETYSDRL RLKSGGNWTN VYRGRIKHTT VAVKVIGDSL 240
241 SDEAFGAKVK LLNEIRHPNL VAIAGFCSQR PKCLLFEYMH NGNLRDNLFT SQRKSRRSKI 300
301 LKWHDRIRIA HQVCSGLGFL HSVKPKPIVH GRLTPSKILL DRNLVPKITG FGLIMHSDQS 360
361 DTKPDVMAFG VLLLHLLTGR NWHGLLKAMS MNQTSILRDL DQTAGKWPLE LAKEFGALAV 420
421 KCSSVNRGGN MDFSTKEIME ELGKIREKAD EF
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| Detection Method: | |
| Confidence: | 56.69897 |
| Match: | 2ptkA |
| Description: | CHICKEN SRC TYROSINE KINASE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [668-765] |
1 11 21 31 41 51
| | | | | |
1 KTKGGYEEAT NSNMDEGDPN DIPSVFMCPI LQEVMKNPHV AADGFSYELE AIQEWLSMGH 60
61 DTSPMTNLRL DYQMLTPNHT LRSLIQDWHS KRAAQASS
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| Detection Method: | |
| Confidence: | 42.0 |
| Match: | 1omwA |
| Description: | G-protein coupled receptor kinase 2, N-terminal domain; G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1); G-protein coupled receptor kinase 2 |
Matching Structure (courtesy of the PDB): |
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