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View Structure Prediction Details

Protein: PAE11_ARATH
Organism: Arabidopsis thaliana
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAE11_ARATH.

Description E-value Query
Range
Subject
Range
PAE8_ARATH - Pectin acetylesterase 8 OS=Arabidopsis thaliana GN=PAE8 PE=2 SV=1
497.0 [0..1] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTWLKQMWSS ILVLAVVVIG ARAVPITYLE SAVAKGAVCL DGSAPAYHFD KGSGSGVNNW  60
   61 IVHMEGGGWC TDIATCVQRK STMKGSSKLM NKDFGFSGIL GGKQSTNPDF YNWNRIKVRY 120
  121 CDGSSFTGDI EAVDPTHKLF FRGARVWRAV IDDLMAKGMS NAQNAILSGC SAGALAAILH 180
  181 CDQFKSTLPK TAKVKCVSDA GYFIHGKDIT GGSYIQSYYA KVVATHGSAK SLPASCTSSM 240
  241 KPDLCFFPQY VAKTLQTPLF VINAAFDSWQ IKNVLAPTSV DKSKAWKTCK LDLKKCTAAQ 300
  301 LQTVQGYRDQ VLAALAPVRS AT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.045757
Match: 2qzpA
Description: No description for 2qzpA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [323-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNGLFLDSCH AHCQGGSAAT WSGDKGPTVA NTKMAKAVGD WFFERSTFQN VDCSSLNCNP  60
   61 TCPAVSTED

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle