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View Structure Prediction Details

Protein: GT29A_ARATH
Organism: Arabidopsis thaliana
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GT29A_ARATH.

Description E-value Query
Range
Subject
Range
ST6GAL1 - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
280.0 [0..5] [398..6]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSVRPLFS ALLFAFFAAT LICRVAIRRS SFSFASAIAE LGSSGLMTED IVFNETLLEF  60
   61 AAIDPGEPNF KQEVDLISDY DHTRRSHRRH FSSMSIRPSE QQRRVSRDIA SSSKFPVTLR 120
  121 SSQAYRYWSE FKRNLRLWAR RRAYEPNIML DLIRLVKNPI D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [162-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VHNGVVSISS ERYLSCAVVG NSGTLLNSQY GDLIDKHEIV IRLNNAKTER FEKKVGSKTN  60
   61 ISFINSNILH QCGRRESCYC HPYGETVPIV MYICQPIHVL DYTLCKPSHR APLLITDPRF 120
  121 DVMCARIVKY YSVKKFLEEK KAKGFVDWSK DHEGSLFHYS SGMQAVMLAV GICEKVSVFG 180
  181 FGKLNSTKHH YHTNQKAELK LHDYEAEYRL YRDLENSPRA IPFLPKEFKI PLVQVYH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.25
Match: 2drjA
Description: No description for 2drjA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle