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View Structure Prediction Details

Protein: GDL35_ARATH
Organism: Arabidopsis thaliana
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL35_ARATH.

Description E-value Query
Range
Subject
Range
gi|2832625, gi|7... - pir||T05034 hypothetical protein F13C5.140 - Arabidopsis thaliana, gi|7268691|emb|CAB78899.1| putati...
301.0 [0..25] [343..292]

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Predicted Domain #1
Region A:
Residues: [1-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKACWLVAA IIFTAATVVY GQQAPCFFVF GDSMSDNGNN NNLKSEAKVN FSPYGNDFPK  60
   61 GPTGRFSNGR TIPDIIGELS GFKDFIPPFA EASPEQAHTG MNYASGGSGL REETSEHLGD 120
  121 RISIRKQLQN HKTSITKANV PAERLQQCLY MINIGSNDYI NNYFMSKPYN TKRRYTPKQY 180
  181 AYSLIIIYRS HLKNLHRLGA RKVAVFGLSQ IGCTPKIMKS HSDGKICSRE VNEAVKIFNK 240
  241 NLDDLVMDFN KKVRGAKFTY VDLFSGGDPQ AFIFLGFKVG GKSCCTVNPG EELCVPNQPV 300
  301 CANRTEYVFW DDLHSTEATN MVVAKGSFDG IISKPYSIAQ LAKE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.42
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle