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View Structure Prediction Details

Protein: KRP3_ARATH
Organism: Arabidopsis thaliana
Length: 222 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KRP3_ARATH.

Description E-value Query
Range
Subject
Range
gi|42362358 - gi|42362358|gb|AAS13374.1| cyclin-dependent kinase inhibitor 1;1 [Glycine max]
193.0 [0..24] [222..2]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKYMKKSKI TGDISVMEVS KATAPSPGVR TRAAKTLALK RLNSSAADSA LPNDSSCYLQ  60
   61 LRSRRLEKPS SLIEPKQPPR VHRSGIKESG SRSRVDSVNS VPVAQSSNED ECFDNFVSVQ 120
  121 VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RATKEYTREQ DNVIPTTSEM EEFFAYAEQQ QQRLFMEKYN FDIVNDIPLS GRYEWVQVKP  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.59
Match: 1jsuC
Description: P27(KIP1) fragment 22-106
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle