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View Structure Prediction Details

Protein: GAUTC_ARATH
Organism: Arabidopsis thaliana
Length: 535 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAUTC_ARATH.

Description E-value Query
Range
Subject
Range
GAUTE_ARATH - Probable galacturonosyltransferase 14 OS=Arabidopsis thaliana GN=GAUT14 PE=2 SV=1
515.0 [0..1] [532..1]

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Predicted Domain #1
Region A:
Residues: [1-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLHISPSLR HVTVVTGKGL REFIKVKVGS RRFSYQMVFY SLLFFTFLLR FVFVLSTVDT  60
   61 IDGDPSPCSS LACLGKRLKP KLLGRRVDSG NVPEAMYQVL EQPLSEQELK GRSDIPQTLQ 120
  121 DFMSEVKRSK SDAREFAQKL KEMVTLMEQR TRTAKIQEYL YRHVASSSIP KQLHCLALKL 180
  181 ANEHSINAAA RLQLPEAELV PMLVDNNYFH FVLASDNILA ASVVAKSLVQ NALRPHKIVL 240
  241 HIITDR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [247-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTYFPMQAWF SLHPLSPAII EVKALHHFDW LSKGKVPVLE AMEKDQRVRS QFRGGSSVIV  60
   61 ANNKENPVVV AAKLQALSPK YNSLMNHIRI HLPELFPSLN KVVFLDDDIV IQTDLSPLWD 120
  121 IDMNGKVNGA VETCRGEDKF VMSKKFKSYL NFSNPTIAKN FNPEECAWAY GMNVFDLAAW 180
  181 RRTNISSTYY HWLDENLKSD LSLWQLGTLP PGLIAFHGHV QTIDPFWHML GLGYQETTSY 240
  241 ADAESAAVVH FNGRAKPWLD IAFPHLRPLW AKYLDSSDRF IKSCHIRAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.0
Match: 1ss9A
Description: Crystal Structural Analysis of Active Site Mutant Q189E of LgtC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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