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View Structure Prediction Details

Protein: BCH2_ARATH
Organism: Arabidopsis thaliana
Length: 303 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCH2_ARATH.

Description E-value Query
Range
Subject
Range
gi|115291577 - gi|115291577|gb|ABI93208.1| beta-carotene hydroxylase 1 [Adonis aestivalis var. palaestina]
353.0 [0..1] [297..5]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGLSTIAV TLKPLNRSSF SANHPISTAV FPPSLRFNGF RRRKILTVCF VVEERKQSSP  60
   61 MDDDNKPEST TSSSEILMTS RLLKKAEKKK SERFTYLIAA VMSSFGITSM AIMAVYYRFS 120
  121 WQMKGGE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [128-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSVLEMFGTF ALSVGAAVGM EFWARWAHRA LWHDSLWNMH ESHHKPREGA FELNDVFAIT  60
   61 NAVPAIGLLY YGFLNKGLVP GLCFGAGLGI TMFGMAYMFV HDGLVHKRFP VGPIANVPYL 120
  121 RKVAAAHQLH HTDKFKGVPY GLFLGPKEVE EVGGKEELEK EISRRIKLYN KGSSTS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.036212
Match: PF04116.4
Description: No description for PF04116.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle