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View Structure Prediction Details

Protein: FBLK1_ARATH
Organism: Arabidopsis thaliana
Length: 382 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBLK1_ARATH.

Description E-value Query
Range
Subject
Range
gi|41687974 - gi|41687974|dbj|BAD08685.1| S haplotype-specific F-box protein 5 [Prunus avium]
173.0 [0..8] [382..1]
gi|112359399 - gi|112359399|gb|ABI15337.1| F-box protein SFB [Prunus salicina]
166.0 [0..16] [382..9]
gi|29420801 - gi|29420801|dbj|BAC66622.1| F-box [Prunus mume]
165.0 [0..16] [382..9]
gi|28866853 - gi|28866853|dbj|BAC65205.1| S haplotype-specific F-box protein d [Prunus dulcis]
164.0 [0..8] [382..1]
gi|92874583 - gi|92874583|gb|ABE82828.1| Cyclin-like F-box; F-box protein interaction domain [Medicago truncatula]
163.0 [0..9] [380..231]
gi|50059168 - gi|50059168|gb|AAT69247.1| S-locus F-box protein 1 [Prunus armeniaca]
161.0 [0..16] [379..9]

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Predicted Domain #1
Region A:
Residues: [1-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKQRCLMM ESLPHEVVEC ILERLDADPL LRFKAVSKQW KSTIESPFFQ RRQFTQRQQS  60
   61 GNPDVLMVSR CADINSEIEA LTTLVLGSSS SVKIPTPWEE EEEEDKEYSV SQDSCDGLVC 120
  121 LFDKFKSGFV FNPATRWYHP LPLCQLQQLL IAIGDGFYDL GYRVSRLGFG KDKLTGTYKP 180
  181 VWLYNSIEIG LENATTCEVF DFSTNAWRYV SPAAPYRIVG CPAPVCVDGS LHWFTECEET 240
  241 KILSFDLHTE TFQVVSKAPF ANVDGFDIVM CNLDNRLCVS EMKLPNQVIW SFNSGNKTWH 300
  301 KMCSINLDI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.30103
Match: 2ovpB
Description: No description for 2ovpB was found.

Predicted Domain #2
Region A:
Residues: [310-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSRWFGPTQV CAVLPLALLD GKKKKKKKLL FYCRVRKRTM VVHDDETKSY DVAFEADSIG  60
   61 HPVCYFPSLI SIS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.897 d.317.1 Description not found.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle