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View Structure Prediction Details

Protein: RLF25_ARATH
Organism: Arabidopsis thaliana
Length: 74 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLF25_ARATH.

Description E-value Query
Range
Subject
Range
RLF8_ARATH - Protein RALF-like 8 OS=Arabidopsis thaliana GN=RALFL8 PE=2 SV=1
94.0 [0..1] [74..7]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFMIILLV ICSILIVGRV EANDNKRKYL LLDPCLRPNA PPGCHRQPYK PRTPVNVYSR  60
   61 GCTTINRCRR VQNP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 4.585027
Match: PF05498.2
Description: No description for PF05498.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.585 N/A N/A g.41.7 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
View Download 0.370 N/A N/A d.58.35 Pseudouridine synthase
View Download 0.360 N/A N/A a.55.1 IHF-like DNA-binding proteins
View Download 0.228 N/A N/A d.9.1 Interleukin 8-like chemokines


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle