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View Structure Prediction Details

Protein: gi|8809618, gi|2...
Organism: Arabidopsis thaliana
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8809618, gi|2....

Description E-value Query
Range
Subject
Range
gi|42568368 - gi|42568368|ref|NP_199545.2| palmitoyl protein thioesterase family protein [Arabidopsis thaliana]
310.0 [0..1] [316..1]

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Predicted Domain #1
Region A:
Residues: [1-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKGLTMSCV LVVVAFLAMV HVSVSVPFVV FPEIGTQCSD APNANFTQLL SNLSSSPGFC  60
   61 IEIGEGNPIG ASWLIPLTQQ AEVACDKVTQ MEELSQGYNI VGRAQGSLVA RGLIEFCEGG 120
  121 PPVHNYISLA GPHAGTADLL RCNTSGLICD IANGIGKENP YSDFVQDNLA PSGYFKNPKN 180
  181 VTGYLKDCQY LPKLNNERPY ERNTTYKDRF ASLQNLVFVL FENDTVIVPK ESSWFGFYPD 240
  241 GDLTHVLPVQ ETKLYIEDWI GLKALVVAGK VQFVNVTGDH LIMADEDLVK YVVPLLQDQQ 300
  301 SAPPRLNRKT KEPLHP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.154902
Match: 1eh5A
Description: Palmitoyl protein thioesterase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity 0.971311764662508 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.803734481384781 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle