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View Structure Prediction Details

Protein: gi|21281255, gi|...
Organism: Arabidopsis thaliana
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21281255, gi|....

Description E-value Query
Range
Subject
Range
gi|116312039, gi... - gi|125549128|gb|EAY94950.1| hypothetical protein OsI_016183 [Oryza sativa (indica cultivar-group)], ...
gi|125591085 - gi|125591085|gb|EAZ31435.1| hypothetical protein OsJ_014918 [Oryza sativa (japonica cultivar-group)]
302.0 [0..29] [347..26]

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Predicted Domain #1
Region A:
Residues: [1-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFILSRSL LVLLLSLTAL LSSISISEAT SSFSFTSSGK NASFESEDFA LYGDAKLVDG  60
   61 GSSIQLTDSV SHGGGRVIYK KPIESMNNIK FEYFTGFSTF FSFSISPSRG GRLGFVVFPV 120
  121 NETFDHSLFQ VKFDTFDSFT QIGDSNVAVI VDGATVSERI RNFTIANLEK TEKVLLYAWI 180
  181 NYQAGGKFLE VRLSKSKSFE SVLPLMFDQI DLSQMLRDED EFMVAVNSYS GNVNLHSWSL 240
  241 EVRHSEYEHS WAPVLLEEQL RKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.0
Match: 1fatA
Description: Phytohemagglutinin-L, PHA-L, also arcelin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [264-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EQLRKEEAAK KRTSDRMWEV VTCFVMTFGS TGLVFFAMMH IYAAFKRNNL AMVMQEECGI  60
   61 KTKEFGYKKM EKMEVVTSNA DAKQERK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.04
Match: 2o01G
Description: No description for 2o01G was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle