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View Structure Prediction Details

Protein: IP5PD_ARATH
Organism: Arabidopsis thaliana
Length: 1136 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for IP5PD_ARATH.

Predicted Domain #1
Region A:
Residues: [1-545]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSLIIEEED EEALATLVPV PPRRKTHSYS LQFDHKPHHQ IRKHSLDEVP RSATLASEAV  60
   61 YFDSSDDEFS TGGNITENAA DETNAGAEEY TIVNPPPNVG LGDDDTEPLP EFIGAGGGSG 120
  121 IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA 180
  181 YEAGCGIGGQ VPRGDEDTAP FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS 240
  241 VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP 300
  301 EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR 360
  361 SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS KREKPQGFLQ RSRNAIMGAA 420
  421 GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP 480
  481 VLCFCTFGDR IYVGYASGYI QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR 540
  541 GWYVT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.0
Match: 1nr0A
Description: Actin interacting protein 1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [546-944]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPGPLDNIIR TELSQKETLY ARQDNVRILI GTWNVGQGRA SHDALMSWLG SVTSDVGIVA  60
   61 VGLQEVEMGA GFLAMSAAKE TVGLEGSAVG QWWIDAIGKA LDEKNTFERM GSRQLAGLLI 120
  121 SLWARKDIRT HVGDLDVAAV PCGFGRAIGN KGGVGLRIRV YDRIMCFVNC HLAAHLEAVN 180
  181 RRNADFNHIF RLMVFSRGQN LSNAAAAGVS TSAYTTKSNT IPSTGAEEIK SDLAAADMVA 240
  241 FFGDFNYRLF GITYDEARDF ISQRSFDWLR ERDQLRAEMK VGKVFQGMRE ALITFPPTYK 300
  301 FERNRSGLGG YDSGEKKRIP AWCDRVIYRD TQSSPFSESN LQCPVVSSVI MYEACMDVTE 360
  361 SDHKPVRCKF HATIAHVDKS VRRQELGKII RSNEKILSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.30103
Match: 1i9yA
Description: Synaptojanin, IPP5C domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [945-1136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FEDLRFVPET SVSTNNIVLQ SQDTVILTIT NNSPTSQAIF NILCGGQAVV KDDGEDADYN  60
   61 PRGSFGLPRW LEVSPAAGII NPEGSVDVKV HHEDFYSMEE YVDGIPQNWW CEDTRDKEAI 120
  121 LMVNIRGSCS TTLRSHSVKV RHCFSARVCL LENRPTNLTK NLGGSRRYPT DITRNGSTRP 180
  181 RTEDSVRRGK SR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.39794
Match: 2qv2A
Description: No description for 2qv2A was found.

YRC Informatics Platform - Version 3.0
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