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View Structure Prediction Details

Protein: gi|11994329, gi|...
Organism: Arabidopsis thaliana
Length: 108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11994329, gi|....

Description E-value Query
Range
Subject
Range
gi|91805689, gi|... - gi|9758565|dbj|BAB09066.1| unnamed protein product [Arabidopsis thaliana], gi|91805689|gb|ABE65573.1...
144.0 [0..22] [108..56]
gi|38345320, gi|... - gi|50926412|ref|XP_473153.1| OSJNBa0004N05.17 [Oryza sativa (japonica cultivar-group)], gi|38345320|...
gi|125549006, gi... - gi|125549006|gb|EAY94828.1| hypothetical protein OsI_16618 [Oryza sativa Indica Group], gi|116311083...
114.0 [0..25] [108..44]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQNHHAHEG ASRKRKDTES DLREAATPNW LLAGYMAHEY LTCGTMLGRK LYSGWAEVGP  60
   61 LVSPSPLQSR EVKKARQSYS EVASVFKTDG NHVPGVVNPT QLAKWIQM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.275 a.1.1 Globin-like
View Download 0.232 a.1.1 Globin-like
View Download 0.224 a.25.1 Ferritin-like
View Download 0.224 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.205 a.26.1 4-helical cytokines
View Download 0.202 a.70.1 N-terminal domain of the delta subunit of the F1F0-ATP synthase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle