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View Structure Prediction Details

Protein: FH6_ARATH
Organism: Arabidopsis thaliana
Length: 899 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FH6_ARATH.

Description E-value Query
Range
Subject
Range
gi|109501783 - gi|109501783|ref|XP_224392.4| PREDICTED: similar to Protein diaphanous homolog 3 (Diaphanous-related...
389.0 [0..452] [898..611]
gi|111598672 - gi|111598672|gb|AAH85191.1| Diaphanous homolog 3 (Drosophila) [Mus musculus]
387.0 [0..452] [898..615]
gi|109079043 - gi|109079043|ref|XP_001089232.1| PREDICTED: similar to diaphanous 1 [Macaca mulatta]
387.0 [0..444] [898..768]

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Predicted Domain #1
Region A:
Residues: [1-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD  60
   61 QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS AKPGKKVAIV ISVGIVTLGM 120
  121 LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV 180
  181 SASESNGGTN GPVNSSPYRK LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS 240
  241 SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR 300
  301 SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT 360
  361 QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD FQMLRKVTNS EATTNSTTSP 420
  421 SRKQAFKTPS PKTKAVEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.221849
Match: 1y0fB
Description: No description for 1y0fB was found.

Predicted Domain #2
Region A:
Residues: [439-899]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNSVSAGSLE KSGDGDTDPS KPKLKPLHWD KVRASSDRAT VWDQLKSSSF QLNEDRMEHL  60
   61 FGCNSGSSAP KEPVRRSVIP LAENENRVLD PKKSQNIAIL LRALNVTREE VSEALTDGNP 120
  121 ESLGAELLET LVKMAPTKEE EIKLREYSGD VSKLGTAERF LKTILDIPFA FKRVEAMLYR 180
  181 ANFDAEVKYL RNSFQTLEEA SLELKASRLF LKLLEAVLMT GNRMNVGTNR GDAIAFKLDT 240
  241 LLKLVDIKGV DGKTTLLHFV VQEITRSEGT TTTKDETILH GNNDGFRKQG LQVVAGLSRD 300
  301 LVNVKKSAGM DFDVLSSYVT KLEMGLDKLR SFLKTETTQG RFFDSMKTFL KEAEEEIRKI 360
  361 KGGERKALSM VKEVTEYFHG NAAREEAHPL RIFMVVRDFL GVLDNVCKEV KTMQEMSTSM 420
  421 GSASARSFRI SATASLPVLH RYKARQDDTS SDSEHSSNSS T

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 2j1dG
Description: No description for 2j1dG was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle