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View Structure Prediction Details

Protein: MFL1_ARATH
Organism: Arabidopsis thaliana
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MFL1_ARATH.

Description E-value Query
Range
Subject
Range
gi|115400063, gi... - gi|115400063|ref|XP_001215620.1| hypothetical protein ATEG_06442 [Aspergillus terreus NIH2624], gi|1...
312.0 [0..6] [406..250]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEARLSETLG LPSPNLNHCH FPNEFNSLFT HFSDLTSVQS PIVRNPKLKT KSSQKPPKFS  60
   61 ANFRRSDPPF ASTSISDPTH EKPGPEFLKW IKPASRSSPR IQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLIKQLSVWE RAIIGAGAGG LAGAFTYVTL LPLDAIKTKL QTKGASQVYS NTFDAIVKTF  60
   61 QAKGILGFYS GVSAVIVGST FSSAVYFGTC EFGKSLLSKF PDFPTVLIPP TAGAMGNIIS 120
  121 SAIMVPKELI TQRMQAGASG RSYQVLLKIL EKDGILGLYA GYSATLLRNL PAGVLSYSSF 180
  181 EYLKAAVLEK TKQSHLEPLQ SVCCGALAGA ISASITTPLD VVKTRLMTQI HVEAVDKLGG 240
  241 AMYTGVAGTV KQILTEEGWV GFTRGMGPRV VHSACFSAIG YFAFETARLT ILNEYLKRKE 300
  301 ESEANVAADS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.69897
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle