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View Structure Prediction Details

Protein: gi|15724150, gi|...
Organism: Arabidopsis thaliana
Length: 199 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15724150, gi|....

Description E-value Query
Range
Subject
Range
TIG_STAHJ - Trigger factor OS=Staphylococcus haemolyticus (strain JCSC1435) GN=tig PE=3 SV=1
133.0 [0..71] [197..1]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTIIHSLSF CSFNSTTINP KPRFQFSSFL TLPPTYSVQQ KLCTRATNRQ FVAVCAAPSD  60
   61 VETSSKDESV LITKVETETS NEVKVHVQVS GEKTQTVFNH VFEKMVAAAQ PIPGFRRVKG 120
  121 GKTPNIPKDV LLEILGYSKV YKQVIKKLIN SAIEDYVKQE DLKVGKELTV VQSYEDLEET 180
  181 FEPGESFSFD ATIKLQEAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.221849
Match: 1t11A
Description: Trigger Factor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.074040936650541 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle