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View Structure Prediction Details

Protein: SR43C_ARATH
Organism: Arabidopsis thaliana
Length: 373 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SR43C_ARATH.

Description E-value Query
Range
Subject
Range
gi|109075425 - gi|109075425|ref|XP_001095471.1| PREDICTED: ankyrin 2, neuronal isoform 12 [Macaca mulatta]
341.0 [0..6] [372..251]

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Predicted Domain #1
Region A:
Residues: [1-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKVFLAMDT CALVIHQSLS RIKLSPPKSS SSSSSAFSPE SLPIRRIELC FRGAICAAVQ  60
   61 RNYEETTSSV EEAEEDDESS SSYGEVNKII GSRTAGEGAM EYLIEWKDGH SPSWVPSSYI 120
  121 AADVVSEYET PWWTAARKAD EQALSQLLED RDVDAVDENG RTALLFVAGL GSDKCVRLLA 180
  181 EAGADLDHRD MRGGLTALHM AAGYVRPEVV EALVELGADI EVEDERGLTA LELAREILKT 240
  241 TPKGNPMQFG RRIGLEKVIN VLEGQVFEYA EVDEIVEKRG KGKDVEYLVR WKDGGDCEWV 300
  301 KGVHVAEDVA KDYEDGLEYA VAESVIGKRV GDDGKTIEYL VKWTDMSDAT WEPQDNVDST 360
  361 LVLLYQQQQP MNE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.0
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle