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View Structure Prediction Details

Protein: gi|21436303, gi|...
Organism: Arabidopsis thaliana
Length: 123 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21436303, gi|....

Description E-value Query
Range
Subject
Range
NLTP_BOVIN - Non-specific lipid-transfer protein OS=Bos taurus GN=SCP2 PE=1 SV=2
145.0 [0..3] [123..424]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTQLKSDA IMDMMKEHLS TDAGKEVTEK IGLVYQINIA PKKLGFEEVT YIVDLKKGEV  60
   61 TKGKYEGGKV DATFSFKDDD FVKVATGKMN PQMAFIRGAM KIKGSLSAAQ KFTPDIFPKP 120
  121 SKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.522879
Match: 1iktA
Description: SCP2-like domain of MFE-2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
sterol carrier protein X-related thiolase activity 0.757548542700829 bayes_pls_golite062009
binding 0.435013873390091 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle