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View Structure Prediction Details

Protein: GOLS3_ARATH
Organism: Arabidopsis thaliana
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GOLS3_ARATH.

Description E-value Query
Range
Subject
Range
gi|4588376 - gi|4588376|gb|AAD26116.1|AF106954_1 galactinol synthase [Brassica napus]
292.0 [0..2] [334..13]

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Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPEMNNKLS YGEKKRAYVT FLAGTGDYVK GVVGLAKGLR KTKSKYPLVV AVLPDVPADH  60
   61 RRQLLDQGCV IKEIQPVYPP DNQTQFAMAY YVLNYSKLRI WKFVEYSKLI YLDGDIQVFE 120
  121 NIDHLFDLPD GNFYAVKDCF CEKTWSHTPQ YKIGYCQQCP DKVTWPESEL GPKPPLYFNA 180
  181 GMFVYEPSLP TYYNLLETLK VVPPTPFAEQ DFLNMYFKDI YKPIPPVYNL VLAMLWRHPE 240
  241 NIELNEAKVV HYCAAGAKPW RFTGQEGNME REDIKMLVEK WWDIYNDESL DYKNFNVHCG 300
  301 QKEDVHRKPK TLPQFFTDLS EADVLQCAKA PSAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.045757
Match: 1zcyA
Description: apo form of a mutant of glycogenin in which Asp159 is replaced by Ser
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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