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View Structure Prediction Details

Protein: GPAT4_ARATH
Organism: Arabidopsis thaliana
Length: 503 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPAT4_ARATH.

Description E-value Query
Range
Subject
Range
gi|17064780, gi|... - gi|20259892|gb|AAM13293.1| unknown protein [Arabidopsis thaliana], gi|17064780|gb|AAL32544.1| Unknow...
339.0 [0..1] [503..1]

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Predicted Domain #1
Region A:
Residues: [1-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL  60
   61 SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA VLTRFYAADV RKDSFEVFDK 120
  121 CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL 180
  181 AILKEFGDDS PDLGLGDRTS DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.221849
Match: 1f5sA
Description: Phosphoserine phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.02290994020378 bayes_pls_golite062009
hydrolase activity 0.71914501009647 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [235-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HDGRLVQRPT PLNALIIYLW LPFGFMLSVF RVYFNLPLPE RFVRYTYEIL GIHLTIRGHR  60
   61 PPPPSPGKPG NLYVLNHRTA LDPIIIAIAL GRKITCVTYS VSRLSLMLSP IPAVALTRDR 120
  121 VADAARMRQL LEKGDLVICP EGTTCREPYL LRFSALFAEL SDRIVPVAMN CKQGMFNGTT 180
  181 VRGVKFWDPY FFFMNPRPSY EATFLDRLPE EMTVNGGGKT PFEVANYVQK VIGGVLGFEC 240
  241 TELTRKDKYL LLGGNDGKVE SINKTKSME

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.63
Match: 1k30A
Description: Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle