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View Structure Prediction Details

Protein: gi|20148709, gi|...
Organism: Arabidopsis thaliana
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20148709, gi|....

Description E-value Query
Range
Subject
Range
CE01611 - status:Confirmed UniProt:Q09413 protein_id:CAA86857.1
216.0 [0..4] [218..213]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFERLTKKP PSLVDLCVRK AIDNVKYIGY VGGVDFQLLE QILQHCTLEQ LKHIEDATDD  60
   61 TDLSPITDKF WKGFYKKHYG EEDMKDLIED LEWNKVNDFK WRNLYELKVI AVQQKEKELG 120
  121 GRLKERYKDE NERKQSRQTK VCSKAPPSKR 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 5.244125
Match: PF06881.2
Description: No description for PF06881.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFWGNSASGY NLGHVKSNIM KKAKIDLLKS QEVKNLTAIK RNTIQKSFSI STPKKTGLSA  60
   61 NSPSTSRSIP YGGRNLTETK KNTIQKSFSI SAPKRTGLSA NAPSTSRSVP SGGQKLPPRR 120
  121 INGLPGTAPS TSKNAATRQK HVM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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