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View Structure Prediction Details

Protein: gi|22136274, gi|...
Organism: Arabidopsis thaliana
Length: 440 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22136274, gi|....

Description E-value Query
Range
Subject
Range
gi|92892963 - gi|92892963|gb|ABE91477.1| RabGAP/TBC [Medicago truncatula]
298.0 [0..12] [440..17]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKREDEQQK RDDSRFNQTL KNVQGFLKGR SIPGKVLLTR RSDPPPYPIS PTYQRSLSEN  60
   61 DAGRNELFES PVEVEDHNSS KKHDNTYAGK LRSNSSA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERSVKEVQNL KIGVRSSDSA RVMKFNKVLS ETTVILEKLR ELAWNGVPHY MRPDVWRLLL  60
   61 GYAPPNSDRR EAVLRRKRLE YLESVGQFYD LPDSERSDDE INMLRQIAVD CPRTVPDVSF 120
  121 FQQEQVQKSL ERILYTWAIR HPASGYVQGI NDLVTPFLVI FLSEYLDGGV DSWSMDDLSA 180
  181 EKVSDVEADC YWCLTKLLDG MQDHYTFAQP GIQRLVFKLK ELVRRIDEPV SRHMEEHGLE 240
  241 FLQFAFRWYN CLLIREIPFN LINRLWDTYL AEGDALPDFL VYIYASFLLT WSDELKKLDF 300
  301 QEMVMFLQHL PTHNWSDQEL EMVLSRAYMW HSMFNNSPNH LAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.69897
Match: 2qfzA
Description: No description for 2qfzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle