| Protein: | CLC1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 338 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLC1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
197.0 | [0..1] | [338..1] |
|
|
186.0 | [0..47] | [338..1535] |
|
|
185.0 | [0..1] | [212..1] |
|
|
181.0 | [0..1] | [212..1] |
|
|
175.0 | [0..28] | [212..24] |
|
|
173.0 | [0..28] | [212..24] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MATFDDGDFP AQTHSPSEHE DFGGYDNFSE AQQPPTQHQS GGFSSFNGDP ASPNGYGFGA 60
61 SSPNHDFSSP FES
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.558 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.465 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.393 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.393 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.372 | a.218.1 | Description not found. |
| View | Download | 0.371 | a.64.1 | Saposin |
|
Region A: Residues: [74-171] |
1 11 21 31 41 51
| | | | | |
1 SVNDANGNGG GSGGDAIFAS DGPILPDPNE MREEGFQRRE WRRLNTIHLE EKEKKEKEMR 60
61 NQIITEAEDF KKAFYEKRDK TIETNKTDNR EKEKLYWA
|
| Detection Method: | |
| Confidence: | 24.522879 |
| Match: | 1xi4J |
| Description: | Clathrin D6 Coat |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [172-338] |
1 11 21 31 41 51
| | | | | |
1 NQEKFHKEVD KHYWKAIAEL IPREVPNIEK KRGKKDPDKK PSVNVIQGPK PGKPTDLGRM 60
61 RQIFLKLKTN PPPHMMPPPP PAKDAKDGKD AKDGKDAKTG KDGKDAKGGK DAKDLKDGKP 120
121 ADPKVTEEKR PSPAKDASVE TAKPDAAASG EGEKPVAVTE AEGTKAE
|
| Detection Method: | |
| Confidence: | 17.522879 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
