| Protein: | PME47_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 624 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME47_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
657.0 | [0..85] | [620..69] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MQTHSSSLVF LALLCLSWAL LVSPTRPPSQ PPSHPPIQPS SQPPTQPPSQ PPTQPPTQPP 60
61 SHPPTQPPTP
|
| Detection Method: |  |
| Confidence: | 3.09691 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [71-242] |
1 11 21 31 41 51
| | | | | |
1 PPSQSPSQPS PLPPNIACKS TPYPKLCRTI LSAVKSSPSD PYHYGKFTMK QCLKQARRLS 60
61 KVINRFAQRV EADPGTSTVE EVSAVADCGE LAELSVEYLE TVTEELKAAE LMTAALVDRV 120
121 TSLLGGVVTN QQTCLDGLVD AKSGFATAIG TPLGNLTRLY SVSLGLVSHA LN
|
| Detection Method: | |
| Confidence: | 11.522879 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [243-624] |
1 11 21 31 41 51
| | | | | |
1 RNLKRYKGSK GKIFGGGNKP VREPLETLIK VLRKTCDKGK DCRKANRNLG ELGETSGGSI 60
61 LVREAVTVGP YETDNFPTIT EAVAAAPNHT FPEQGYFVIY ARAGLYEEYV VISNKKRNIM 120
121 LIGDGINKTI ISGNHSFIDG WTTYNSSTFA VVGDRFVAVD VTFRNTAGPE KHQAVAVRNN 180
181 ADGSTFYRCS FEGYQDTLYV HSLRQFYREC DIYGTIDFIF GNAAAIFQNC NIYARKPMAN 240
241 QKNAVTAHGR TDPNQKTGIS IINCTIGAAP DLAADPKSTM TFLGRPWKPY SRTVYIQSYI 300
301 SDVVQPVGWL EWNGTTGLDT ISYGEYDNFG PGADTSKRVQ WSGYSLLNLV QAMNFTVYNF 360
361 TLGDTWLPQT DIPFYGGLLH TE
|
| Detection Method: | |
| Confidence: | 134.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
