YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|15230952, gi|...
Organism: Arabidopsis thaliana
Length: 497 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15230952, gi|....

Description E-value Query
Range
Subject
Range
gi|114657936 - gi|114657936|ref|XP_001175096.1| PREDICTED: hypothetical protein isoform 11 [Pan troglodytes]
738.0 [0..1] [496..87]

Back

Predicted Domain #1
Region A:
Residues: [1-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMLLGGQAT NGALRSKTKI VCTLGPASRS VEMIEKLLKA GMNVARFNFS HGSHSYHQET  60
   61 LDNLRTAMDN TGILCAVMLD TKSPVIRTGF LKEGKPIQLK QGQEITISID YKIQGDSNTI 120
  121 SMSYKKLAED LKPGDVILCS DGTISLNVLS CDKYLGLVRC RCENSALLGE RKNVNLPGIV 180
  181 VDLPTLTEKD KEDIMQWGVP NKIDIIALSF VRKGSDLIQV RKLLGEHSKS IMLMSKVENQ 240
  241 EGVMNFDKIL ENSDAFMVAR GDLGMEIPIE KMFLAQKTMI NKANAHGKPV VTATQMLESM 300
  301 TVSPRPTRAE ATDVANAVLD GTDCVMLSGE TAAGAHPETA VLTMSRICKE AEDFIDYDIL 360
  361 HKKTLGMVSL PLSPIESLAA SAVSTARSVF ASAIVVLTRG GYTAELVAKY RPSVPILSVI 420
  421 MPEIAECSDS VAHVARRGLI YRGIIPVVGC SARDSTEEMI RLAIGFAKTK GICKTGDSIV 480
  481 ALHKIDGSSI VRIVSVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1zjhA
Description: Structure of human muscle pyruvate kinase (PKM2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle