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View Structure Prediction Details

Protein: M3K1_ARATH
Organism: Arabidopsis thaliana
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for M3K1_ARATH.

Description E-value Query
Range
Subject
Range
gi|23197816, gi|... - gi|23197816|gb|AAN15435.1| Unknown protein [Arabidopsis thaliana], gi|17064766|gb|AAL32537.1| Unknow...
480.0 [0..1] [608..1]

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Predicted Domain #1
Region A:
Residues: [1-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT  60
   61 RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD AWEACKKRSS SDVVNRFKSF 120
  121 DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL 180
  181 VADGVVENRR VMERTPTIVK SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI 240
  241 DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD 300
  301 ETCSFT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [307-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNEGDSSSTV SNTSPIYPDG GAIITSWQKG QLLGRGSFGS VYEGISGDGD FFAVKEVSLL  60
   61 DQGSQAQECI QQLEGEIKLL SQLQHQNIVR YRGTAKDGSN LYIFLELVTQ GSLLKLYQRY 120
  121 QLRDSVVSLY TRQILDGLKY LHDKGFIHRD IKCANILVDA NGAVKLADFG LAKVSKFNDI 180
  181 KSCKGTPFWM APEVINRKDS DGYGSPADIW SLGCTVLEMC TGQIPYSDLE PVQALFRIGR 240
  241 GTLPEVPDTL SLDARLFILK CLKVNPEERP TAAELLNHPF VRRPLPSVGS GGSGSASPLL 300
  301 RR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.39794
Match: 1f3mC
Description: pak1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle