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View Structure Prediction Details

Protein: DIR5_ARATH
Organism: Arabidopsis thaliana
Length: 182 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIR5_ARATH.

Description E-value Query
Range
Subject
Range
gi|6694707 - gi|6694707|gb|AAF25364.1|AF210068_1 dirigent-like protein [Thuja plicata]
242.0 [0..8] [182..11]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGQMKSFLF LFVFLVLTKT VISARKPSKS QPKPCKNFVL YYHDIMFGVD DVQNATSAAV  60
   61 TNPPGLGNFK FGKLVIFDDP MTIDKNFQSE PVARAQGFYF YDMKNDYNAW FAYTLVFNST 120
  121 QHKGTLNIMG ADLMMVQSRD LSVVGGTGDF FMSRGIVTFE TDTFEGAKYF RVKMDIKLYE 180
  181 CY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.3
Match: 1z8kA
Description: X-ray structure of allene oxide cyclase from Arabidopsis thaliana at3g25770
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle