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View Structure Prediction Details

Protein: VATB2_ARATH
Organism: Arabidopsis thaliana
Length: 487 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VATB2_ARATH.

Description E-value Query
Range
Subject
Range
ATPB_AGAAF - ATP synthase subunit beta, chloroplastic OS=Agapanthus africanus GN=atpB PE=3 SV=1
555.0 [0..1] [475..1]

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Predicted Domain #1
Region A:
Residues: [1-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAAENNLEM EGTLEIGMEY RTVSGVAGPL VILEKVKGPK YQEIVNIRLG DGTTRRGQVL  60
   61 EVDGEKAVVQ VFEGTSGIDN KYTTVQFTGE VLKTPVSLDM LGRIFNGSGK PIDNGPPILP 120
  121 EAYLDISGSS INPSERTYPE EMIQTGISTI DVMNSIARGQ KIPLFSAAGL PHNEIAAQIC 180
  181 RQAGLVKRLE KSDNLLEHQE DDNFAIVFAA MGVNMETAQF FKRDFEENGS MERVTLFLNL 240
  241 ANDPTIERII TPRIALTTAE YLAYECGKHV LVILTDMSSY ADALREVSAA REEVPGRRGY 300
  301 PGYMYTDLAT IYERAGRIEG RKGSITQIPI LTMPNDDITH PTPDLTGYIT EGQIYIDRQL 360
  361 HNRQIYPPIN VLPSLSRLMK SAIGEGMTRR DHSDVSNQLY ANYAIGKDVQ AMKAVVGEEA 420
  421 LSSEDLLYLE FLDKFERKFV AQGAYDTRNI FQSLDLAWTL LRIFPRELLH RIPAKTLDQF 480
  481 YSRDTTN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 108.0
Match: 2c61A
Description: No description for 2c61A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle