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View Structure Prediction Details

Protein: CLE4_ARATH
Organism: Arabidopsis thaliana
Length: 80 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLE4_ARATH.

Description E-value Query
Range
Subject
Range
CLE3_ARATH - CLAVATA3/ESR (CLE)-related protein 3 OS=Arabidopsis thaliana GN=CLE3 PE=2 SV=1
108.0 [0..20] [80..22]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFKLWVCL ILLLLEFSVH QCRPLVAEES PSDSGNIRKI MRELLKRSEE LKVRSKDGQT  60
   61 VLGTLDSKRL SPGGPDPRHH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.529 d.57.1 DNA damage-inducible protein DinI
View Download 0.501 a.112.1 Description not found.
View Download 0.497 a.28.3 Retrovirus capsid protein C-terminal domain
View Download 0.385 a.4.1 Homeodomain-like
View Download 0.292 a.2.7 tRNA-binding arm


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle