| Protein: | gi|15230321, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 648 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15230321, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
850.0 | [0..1] | [647..1] |
|
|
815.0 | [0..1] | [647..1] |
|
|
811.0 | [0..1] | [647..1] |
|
|
780.0 | [0..1] | [648..1] |
|
|
722.0 | [0..1] | [647..146] |
|
|
714.0 | [0..1] | [646..602] |
|
|
712.0 | [0..3] | [647..153] |
|
Region A: Residues: [1-166] |
1 11 21 31 41 51
| | | | | |
1 MGTSQSREDR ISESDTESDS DYYEEEDEDQ YDDAKKQGSS SVSGTRPSDS SSSSGPTDSS 60
61 SLDIEQKLKA LKLKYPSSSS VTPKMKNAVK LYRHIGGNTP KAKWIVSDKM TSYKFVKTSS 120
121 VDGEDIDDYD DCEESGEGGE SFWFLGVGTK VKARVSTDMQ LKMFGD
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [167-239] |
1 11 21 31 41 51
| | | | | |
1 QRRVDFVSNG VWALKFLTDE DYRKFVTRFQ DYLFENVYKI RASEENRVKV YGKDFIGWAN 60
61 PEAADDSMWE DAE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.588 | a.34.4 | Description not found. |
| View | Download | 0.561 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.539 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.534 | a.239.1 | Description not found. |
| View | Download | 0.521 | d.74.5 | Hypothetical protein Yml108w |
| View | Download | 0.513 | a.8.11 | Description not found. |
| View | Download | 0.499 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.484 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.483 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.442 | f.13.1 | Family A G protein-coupled receptor-like |
|
Region A: Residues: [240-312] |
1 11 21 31 41 51
| | | | | |
1 APPEEEETQG KRNTDLTEEF EEVANGGVQS LTLGALDNSF LVNDYGVQVY RNMERGIHGK 60
61 GVCVRFDSGN SKF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.661 | g.7.1 | Snake toxin-like |
| View | Download | 0.642 | a.4.1 | Homeodomain-like |
| View | Download | 0.573 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.573 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.560 | a.4.1 | Homeodomain-like |
| View | Download | 0.544 | a.159.2 | FF domain |
| View | Download | 0.488 | a.4.1 | Homeodomain-like |
| View | Download | 0.444 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [313-513] |
1 11 21 31 41 51
| | | | | |
1 GSGSSQTTPN KALLMRAETN MMLMSPAKQG KPNSTGVKQL DIESGKIVTE WKFEKDGTEI 60
61 TMRDITNDTK GSQLDPSEST FLGLDDNRLC QWDMRDRRGI VQNIDSPILE WTQGHQFSRG 120
121 TNFQCFATTG DGSIVVGSLD GKIRLYSKTS MRMAKTAFPG LGSPITHVDV SYDGKWILGT 180
181 TDTYLVLICT LFTDKNGLTK T
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [514-648] |
1 11 21 31 41 51
| | | | | |
1 GFSGRMGNKI PAPRLLKLTP LDSHLAGKDN KFHGGHFSWV TESGKQERHI VATVGKFSVI 60
61 WDLERVKNSA HECYRNQQGL KSCYCYKILL KDESIVESRF MHDNFSFSGN KSPEAPLVVA 120
121 TPLKVSSISL SGKRL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.672 | N/A | N/A | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.672 | N/A | N/A | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.656 | N/A | N/A | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.656 | N/A | N/A | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.592 | N/A | N/A | c.26.1 | Nucleotidylyl transferase |
| View | Download | 0.592 | N/A | N/A | c.26.1 | Nucleotidylyl transferase |
| View | Download | 0.542 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.536 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.536 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.508 | N/A | N/A | c.28.1 | Cryptochrome/photolyase, N-terminal domain |
