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View Structure Prediction Details

Protein: APX3_ARATH
Organism: Arabidopsis thaliana
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APX3_ARATH.

Description E-value Query
Range
Subject
Range
gi|7484726, gi|2... - pir||T09845 L-ascorbate peroxidase (EC 1.11.1.11), glyoxysomal - upland cotton, gi|254036194|gb|ACT5...
324.0 [0..1] [287..1]

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Predicted Domain #1
Region A:
Residues: [1-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPIVDAEY LKEITKARRE LRSLIANKNC APIMLRLAWH DAGTYDAQSK TGGPNGSIRN  60
   61 EEEHTHGANS GLKIALDLCE GVKAKHPKIT YADLYQLAGV VAVEVTGGPD IVFVPGRKDS 120
  121 NVCPKEGRLP DAKQGFQHLR DVFYRMGLSD KDIVALSGGH TLGRAHPERS GFDGPWTQEP 180
  181 LKFDNSYFVE LLKGESEGLL KLPTDKTLLE DPEFRRLVEL YAKDEDAFFR DYAESHKKLS 240
  241 ELGFNPNSSA GKAVADSTIL AQSAFGVAVA AAVVAFGYFY EIRKRMK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.0
Match: 1oafA
Description: Ascorbate peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle