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View Structure Prediction Details

Protein: GGR_ARATH
Organism: Arabidopsis thaliana
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GGR_ARATH.

Description E-value Query
Range
Subject
Range
gi|56122554 - gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var. palaestina]
293.0 [0..2] [322..20]

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Predicted Domain #1
Region A:
Residues: [1-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFSGSAIPL SSFCSLPEKP HTLPMKLSPA AIRSSSSSAP GSLNFDLRTY WTTLITEINQ  60
   61 KLDEAIPVKH PAGIYEAMRY SVLAQGAKRA PPVMCVAACE LFGGDRLAAF PTACALEMVH 120
  121 AASLIHDDLP CMDDDPVRRG KPSNHTVYGS GMAILAGDAL FPLAFQHIVS HTPPDLVPRA 180
  181 TILRLITEIA RTVGSTGMAA GQYVDLEGGP FPLSFVQEKK FGAMGECSAV CGGLLGGATE 240
  241 DELQSLRRYG RAVGMLYQVV DDITEDKKKS YDGGAEKGMM EMAEELKEKA KKELQVFDNK 300
  301 YGGGDTLVPL YTFVDYAAHR HFLLPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.154902
Match: 2j1pA
Description: No description for 2j1pA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle