YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|9759194, gi|1...
Organism: Arabidopsis thaliana
Length: 669 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9759194, gi|1....

Description E-value Query
Range
Subject
Range
YSL3_ARATH - Metal-nicotianamine transporter YSL3 OS=Arabidopsis thaliana GN=YSL3 PE=2 SV=1
592.0 [0..1] [669..1]

Back

Predicted Domain #1
Region A:
Residues: [1-68]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSMMMEREG RNEIEREVID DLEETQNEGD DFKSIPPWKE QITFRGIVAS LIIGIIYSVI  60
   61 VMKLNLTT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [69-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLVPNLNVSA ALLAFVFLRS WTKLLTKAGI VTKPFTKQEN TVVQTCAVAC YSIAVGGGFG  60
   61 SYLLGLNRIT YEQSGGTHTD GNYPEGTKEP GIGWMTAFLF FTCFVGLLAL VPLRKIMIID 120
  121 YKLTYPSGTA TAVLINGFHT PKGNKMAKKQ VFGFVKYFSF SFIWAFFQWF FSGGTECGFI 180
  181 QFPTFGLEAL KNTMTYVGAG MICPHIVNIS LLFGAVLSWG IMWPLIKGLK GDWFPSTLPE 240
  241 NSMKSLNGYK VFISISLILG DGLYQFIKIL FKTGINMYVK LNNRNSGKSN SEKDKQSIA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [368-521]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLKRDEIFVR DSIPLWVAAV GYAAFSVVSI IAIPIMFPEL KWYFIVVAYM LAPSLGFSNA  60
   61 YGAGLTDMNM AYNYGKVALF ILAAMAGKQN GVVAGLVGCG LIKSIVSISS DLMHDFKTGH 120
  121 LTLTSPRSML VSQAIGTAIG CVVAPLTFFL FYKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [522-669]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FDVGNQEGEY KAPYALVYRN MAILGVEGFS ALPQHCLQLC YGFFAFAVAA NLVRDRLPDK  60
   61 IGNWVPLPMA MAVPFLVGGY FAIDMCVGSL IVFAWNMRDR VKAGLMVPAV ASGLICGDGL 120
  121 WILPSSVLAL AGVRPPICMG FMPSKYSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle