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View Structure Prediction Details

Protein: P2A02_ARATH
Organism: Arabidopsis thaliana
Length: 194 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2A02_ARATH.

Description E-value Query
Range
Subject
Range
gi|8307830 - gi|8307830|gb|AAF74345.1|AF150627_1 phloem protein 2 [Cucurbita moschata]
208.0 [0..31] [193..46]

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Predicted Domain #1
Region A:
Residues: [1-68]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVKRRKTVS CCTREISQLH GQSLKQINIG VGSLILTKHQ GYEFYCKKVT FVFFCFFKIS  60
   61 LNSAYLYT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [69-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYSDVRTEVA KMERVAWLEV VGKFETEKLT PNSLYEVVFV VKLIDSAKGW DFRVNFKLVL  60
   61 PTGETKERRE NVNLLERNKW VEIPAGEFMI SPEHLSGKIE FSMLEVKSDQ WKSGLIVKGV 120
  121 AIRPKN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.46
Match: 1h6xA
Description: Xylan-binding domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle