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View Structure Prediction Details

Protein: GRF6_ARATH
Organism: Arabidopsis thaliana
Length: 244 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRF6_ARATH.

Description E-value Query
Range
Subject
Range
GRF2_ARATH - Growth-regulating factor 2 OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=1
195.0 [0..3] [139..161]
GRF1_ORYSJ - Growth-regulating factor 1 OS=Oryza sativa subsp. japonica GN=GRF1 PE=3 SV=1
193.0 [0..5] [125..17]
gi|6573149 - gi|6573149|gb|AAF17567.1|AF201895_1 growth-regulating factor 1 [Oryza sativa]
GRF1_ORYSI - Growth-regulating factor 1 OS=Oryza sativa subsp. indica GN=GRF1 PE=2 SV=1
193.0 [0..5] [123..17]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRIPFTES QWEELENQAL VFKYLAANMP VPPHLLFLIK RPFLFSSSSS SSSSSSFFSP  60
   61 TLSPHFGWNV YEMGMGRKID AEPGRCRRTD GKKWRCSKEA YPDSKYCERH MHRGKNRSSS 120
  121 RKPPPTQFTP NLFLDSSSRR RR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGYMDDFFSI EPSGSIKSCS GSAMEDNDDG SCRGINNEEK QPDRHCFILG TDLRTRERPL  60
   61 MLEEKLKQRD HDNEEEQGSK RFYRFLDEWP SSKSSVSTSL FI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle