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View Structure Prediction Details

Protein: NAC22_ARATH
Organism: Arabidopsis thaliana
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC22_ARATH.

Description E-value Query
Range
Subject
Range
gi|6056383, gi|2... - gi|6056383|gb|AAF02847.1|AC009894_18 Similar to NAM protein [Arabidopsis thaliana], pir||C96601 hypo...
335.0 [0..1] [324..1]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METEEEMKES SISMVEAKLP PGFRFHPKDD ELVCDYLMRR SLHNNHRPPL VLIQVDLNKC  60
   61 EPWDIPKMAC VGGKDWYFYS QRDRKYATGL RTNRATATGY WKATGKDRTI LRKGKLVGMR 120
  121 KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH PPNHSLSSPK EDWVLCRVFH KNTEGVICRD 180
  181 NMGSCFDETA SASL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.39794
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [195-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPLMDPYINF DQEPSSYLSD DHHYIINEHV PCFSNLSQNQ TLNSNLTNSV SELKIPCKNP  60
   61 NPLFTGGSAS ATLTGLDSFC SSDQMVLRAL LSQLTKIDGS LGPKESQSYG EGSSESLLTD 120
  121 IGIPSTVWNC 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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