| Protein: | TINY_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 218 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TINY_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
209.0 | [0..2] | [217..17] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MIASESTKSW EASAVRQENE EEKKKPVKDS GKHPVYRGVR KRNWGKWVSE IREPRKKSRI 60
61 WLGTFPSPEM AARAHDVAAL SIKGASAILN FPDLAGSFPR PSSLSPRDIQ VA
|
| Detection Method: |  |
| Confidence: | 24.0 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [113-218] |
1 11 21 31 41 51
| | | | | |
1 ALKAAHMETS QSFSSSSSLT FSSSQSSSSL ESLVSSSATG SEELGEIVEL PSLGSSYDGL 60
61 TQLGNEFIFS DSADLWPYPP QWSEGDYQMI PASLSQDWDL QGLYNY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.614 | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.469 | a.74.1 | Cyclin-like |
| View | Download | 0.438 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.359 | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.329 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
