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View Structure Prediction Details

Protein: gi|10177217, gi|...
Organism: Arabidopsis thaliana
Length: 166 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177217, gi|....

Description E-value Query
Range
Subject
Range
gi|26451059, gi|... - gi|28372934|gb|AAO39949.1| At5g50030 [Arabidopsis thaliana], gi|26451059|dbj|BAC42634.1| unknown pro...
244.0 [0..1] [154..13]

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Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLSEILFI SSSGLTSTKY IDALCQHVEN GTFCMHMLRA YPPAVTATDL FSLANIVINL  60
   61 GISYANNTGA FAAEAAKKEP TLKVQFKSFQ HEYDGIQLYL RMARGELKES PMSANYDIFR 120
  121 CTDITMYLKD VVGGNRDNTS KTFMDMTLQM ENIIDVALGA TVALGG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.1
Match: 1xg2B
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle