| Protein: | gi|15235381, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 694 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15235381, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
536.0 | [0..3] | [694..33] |
|
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512.0 | [0..2] | [690..55] |
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495.0 | [0..9] | [683..166] |
|
Region A: Residues: [1-241] |
1 11 21 31 41 51
| | | | | |
1 MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR 60
61 RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH KNIGIVHLKQ VSSYRESKSD 120
121 HRKFYIFTAT KTLHLRTDSR SDRAAWLQAL ASTRGIVPLQ SINGDFSFVS PKDLSISTER 180
181 LKKRLFEEGM NESLVKECEQ IVDSEFCEVQ EQIKLLHEER KKLLDALRQL EMANLEAEAS 240
241 G
|
| Detection Method: |  |
| Confidence: | 15.30103 |
| Match: | 1fhwA |
| Description: | Grp1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [242-314] |
1 11 21 31 41 51
| | | | | |
1 IHDDVYQLRN HKYSSLGRGK YSECSTSASS DDKQEFEDIS EEDEASFHDT KESFGEPDVG 60
61 SVLTHFKRRT KLP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.425 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.425 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.359 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.270 | a.4.1 | Homeodomain-like |
| View | Download | 0.253 | d.52.8 | Description not found. |
| View | Download | 0.252 | a.217.1 | Description not found. |
| View | Download | 0.247 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.217 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.217 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.209 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [315-694] |
1 11 21 31 41 51
| | | | | |
1 DPAEKERGVS LWSMIKDNVG KDLTRVCLPV YFNEPISSLQ KCFEDLEYSY LLDQAYEYGK 60
61 SGKSLLRALN VAAFAVSGYA STEGRHCKPF NPLLGETYEA DFPEKGIRFF SEKVSHHPTV 120
121 IACHCEGKGW KFWGDTNLRS KFWGRSIQLE PVGILTLEFD DGEIFQWSKV TTTIYNILLG 180
181 KLYCDHHGIM KIRGNRQYSC MLKFKEQSIL DRNPHQVNGF VEDVTGKKAA TVFGKWNDSL 240
241 YYVAGDGINK ASASLLWKAT KAPPNVTRYN FTSFAMTLNE LIPGLEEKLP PTDSRLRPDQ 300
301 RHLENGEYEK ANEEKQRLER RQRMSRQIQE SGWRPRWFEP QGESESYKYT GGYWEARDVK 360
361 SWDDCPNIFG EFTEEVADCA
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| Detection Method: | |
| Confidence: | 65.0 |
| Match: | 1zhtA |
| Description: | Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol |
Matching Structure (courtesy of the PDB): |
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