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View Structure Prediction Details

Protein: PDCT2_ARATH
Organism: Arabidopsis thaliana
Length: 296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDCT2_ARATH.

Description E-value Query
Range
Subject
Range
PDCT1_ARATH - Phosphatidylcholine:diacylglycerol cholinephosphotransferase 1 OS=Arabidopsis thaliana GN=ROD1 PE=1 ...
519.0 [0..1] [295..1]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAVTKTVA PLRRKANPIN GKHTNGVTID GIFDDHNRQI GPINSQMEDI AQKTDDGGGG  60
   61 EWTSKASFMT WTMHDIIYVA RHHWIPCLFA AGVMFFTVVE YTFQMTPASS QPFDLGFVAT 120
  121 RYLHSILASS PNLNTVLAAL NTILVGMQTT YIGCTWAVEG RPRATIAALF MFTCRGILGY 180
  181 STQLPRPQEF LGSGVD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [197-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPVGNVSFFL FYSGHVAGSM IASLDMKRMQ RFRLAMVFDI LNVLQSIRLL GTRGHYTIDI  60
   61 AVGVGAGILF DSLAGKYEEM SKRHLRNTRC SLISKDSLVT 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 1d2tA
Description: Bacterial acid phosphatase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle